UPL code table: Difference between revisions

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m New page: Universal Pathogen list. Used as subcodes for all infection that we track. *See: Pathogens for a list or organisms tracked. Category: Infection Category: Diagnosis Coding
 
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Universal Pathogen list.  Used as subcodes for all infection that we track.
'''UPL - Universal Pathogen list'''.  These are used as [[subcodes]] for all infection that we track in our ICU and Medicine Database.
*See: [[Pathogens]] for a list or organisms tracked.
*Also see: [[Pathogens]]  
 
{| class="wikitable" border=1 <hiddentext> set to 0 for no borders</hiddentext>
|- style="background-color:#FFFF99;font-weight:bold"
|style="font-size:8pt" width="64" height="21" align="center" valign="bottom" | PathogenSubCode
| width="62"  valign="bottom" | Type
| width="417"  valign="bottom" | Pathogen
 
|-
| height="13" align="center" valign="bottom" | 0
|  valign="bottom" |  No Value
|style="font-weight:bold;color:#0000FF"  valign="bottom" | No Value
 
|-
| height="13" align="center" valign="bottom" | 4
|  valign="bottom" | anaerobe
|  valign="bottom" | Anaerobe-Other (Prevotella, Bacteroides, peptostreptococcus or other)
 
|-
| height="13" align="center" valign="bottom" | 5
|  valign="bottom" | anaerobe
|  valign="bottom" | Bacteroides fragilis
 
|-
| height="13" align="center" valign="bottom" | 12
|  valign="bottom" | anaerobe
|  valign="bottom" | Clostridium difficile
 
|-
| height="13" align="center" valign="bottom" | 13
|  valign="bottom" | anaerobe
|  valign="bottom" | Clostridium other species (gangrene)
 
|-
| height="13" align="center" valign="bottom" | 8
|  valign="bottom" | bacteria
|  valign="bottom" | Chlamydia spp
 
|-
| height="13" align="center" valign="bottom" | 30
|  valign="bottom" | bacteria
|  valign="bottom" | Legionella spp
 
|-
| height="13" align="center" valign="bottom" | 35
|  valign="bottom" | bacteria
|  valign="bottom" | Mycobacteria-Other (not M. tuberculosis)
 
|-
| height="13" align="center" valign="bottom" | 36
|  valign="bottom" | bacteria
|  valign="bottom" | Mycoplasma spp
 
|-
| height="13" align="center" valign="bottom" | 93
|  valign="bottom" | bacteria
|  valign="bottom" | Syphilis-Treponema Pallidium
 
|-
| height="13" align="center" valign="bottom" | 94
|  valign="bottom" | bacteria
|  valign="bottom" | Lyme-Borrelia Burgdorferi
 
|-
| height="13" align="center" valign="bottom" | 66
|  valign="bottom" | g-
|  valign="bottom" | OTHER - Gram negative
 
|-
| height="13" align="center" valign="bottom" | 67
|  valign="bottom" | g+
|  valign="bottom" | OTHER - Gram positive
 
|-
| height="13" align="center" valign="bottom" | 20
|  valign="bottom" | g+c
|  valign="bottom" | Enterococcus faecalis
 
|-
| height="13" align="center" valign="bottom" | 21
|  valign="bottom" | g+c
|  valign="bottom" | Enterococcus faecium
 
|-
| height="13" align="center" valign="bottom" | 22
|  valign="bottom" | g+c
|  valign="bottom" | Enterococcus -vancomycin-resistant (VRE)
 
|-
| height="13" align="center" valign="bottom" | 23
|  valign="bottom" | g+c
|  valign="bottom" | Enterooccus spp
 
|-
| height="13" align="center" valign="bottom" | 32
|  valign="bottom" | g+c
|  valign="bottom" | Micrococcus spp
 
|-
| height="13" align="center" valign="bottom" | 47
|  valign="bottom" | g+c
|  valign="bottom" | Staphylococcus aureus
 
|-
| height="13" align="center" valign="bottom" | 48
|  valign="bottom" | g+c
|  valign="bottom" | Staphylococcus aureus (methicillin-resistantant, MRSA)
 
|-
| height="13" align="center" valign="bottom" | 49
|  valign="bottom" | g+c
|  valign="bottom" | Staphylococcus epidermidis
 
|-
| height="13" align="center" valign="bottom" | 50
|  valign="bottom" | g+c
|  valign="bottom" | Staphylococcus spp
 
|-
| height="13" align="center" valign="bottom" | 52
|  valign="bottom" | g+c
|  valign="bottom" | Strep (other beta-hemolytic streptococci)
 
|-
| height="13" align="center" valign="bottom" | 53
|  valign="bottom" | g+c
|  valign="bottom" | Strep viridans (alpha-hemolytic strep other than Enterococcus or S. pneumoniae)
 
|-
| height="13" align="center" valign="bottom" | 54
|  valign="bottom" | g+c
|  valign="bottom" | Streptococcus agglactiae Group B
 
|-
| height="13" align="center" valign="bottom" | 55
|  valign="bottom" | g+c
|  valign="bottom" | Streptococcus pnemoniae
 
|-
| height="13" align="center" valign="bottom" | 56
|  valign="bottom" | g+c
|  valign="bottom" | Streptococcus pyogenes Group A
 
|-
| height="13" align="center" valign="bottom" | 57
|  valign="bottom" | g+c
|  valign="bottom" | Tuberculosis (Mycobacterium tuberculosis)
 
|-
| height="13" align="center" valign="bottom" | 58
|  valign="bottom" | g+c
|  valign="bottom" | Vancomycin-resistant/intermediate S. aureus (VISA/VRSA/VISA)
 
|-
| height="13" align="center" valign="bottom" | 14
|  valign="bottom" | g+r
|  valign="bottom" | Corynebacterium jeikeium
 
|-
| height="13" align="center" valign="bottom" | 15
|  valign="bottom" | g+r
|  valign="bottom" | Corynebacterium spp
 
|-
| height="13" align="center" valign="bottom" | 31
|  valign="bottom" | g+r
|  valign="bottom" | Listeria monocytogenes
 
|-
| height="13" align="center" valign="bottom" | 1
|  valign="bottom" | g-b
|  valign="bottom" | Acinetobacter baumanii
 
|-
| height="13" align="center" valign="bottom" | 2
|  valign="bottom" | g-b
|  valign="bottom" | Acinetobacter lwoffi
 
|-
| height="13" align="center" valign="bottom" | 3
|  valign="bottom" | g-b
|  valign="bottom" | Aeromonas hydrophila
 
|-
| height="13" align="center" valign="bottom" | 6
|  valign="bottom" | g-b
|  valign="bottom" | Burkholderia spp
 
|-
| height="13" align="center" valign="bottom" | 7
|  valign="bottom" | g-b
|  valign="bottom" | Campylobacter spp
 
|-
| height="13" align="center" valign="bottom" | 9
|  valign="bottom" | g-b
|  valign="bottom" | Citrobacter diversus
 
|-
| height="13" align="center" valign="bottom" | 10
|  valign="bottom" | g-b
|  valign="bottom" | Citrobacter freudii
 
|-
| height="13" align="center" valign="bottom" | 11
|  valign="bottom" | g-b
|  valign="bottom" | Citrobacter spp
 
|-
| height="13" align="center" valign="bottom" | 16
|  valign="bottom" | g-b
|  valign="bottom" | E. coli
 
|-
| height="13" align="center" valign="bottom" | 17
|  valign="bottom" | g-b
|  valign="bottom" | Enterobacter aerogenes
 
|-
| height="13" align="center" valign="bottom" | 18
|  valign="bottom" | g-b
|  valign="bottom" | Enterobacter cloacae
 
|-
| height="13" align="center" valign="bottom" | 19
|  valign="bottom" | g-b
|  valign="bottom" | Enterobacter spp
 
|-
| height="26" align="center" valign="bottom" | 24
|  valign="bottom" | g-b
|  valign="bottom" | ESBL (extended spectrum beta-lactamase) g-b, meropenem-resistant organism other than Stenotrophomonas
 
|-
| height="13" align="center" valign="bottom" | 25
|  valign="bottom" | g-b
|  valign="bottom" | Hemophilus influenzae
 
|-
| height="13" align="center" valign="bottom" | 26
|  valign="bottom" | g-b
|  valign="bottom" | Hemophilus spp
 
|-
| height="13" align="center" valign="bottom" | 27
|  valign="bottom" | g-b
|  valign="bottom" | Klebsiella oxytoca
 
|-
| height="13" align="center" valign="bottom" | 28
|  valign="bottom" | g-b
|  valign="bottom" | Klebsiella pneumoniae
 
|-
| height="13" align="center" valign="bottom" | 29
|  valign="bottom" | g-b
|  valign="bottom" | Klebsiella spp
 
|-
| height="13" align="center" valign="bottom" | 34
|  valign="bottom" | g-b
|  valign="bottom" | Morganella morganni
 
|-
| height="13" align="center" valign="bottom" | 39
|  valign="bottom" | g-b
|  valign="bottom" | Proteus mirabilis
 
|-
| height="13" align="center" valign="bottom" | 40
|  valign="bottom" | g-b
|  valign="bottom" | Proteus spp
 
|-
| height="13" align="center" valign="bottom" | 41
|  valign="bottom" | g-b
|  valign="bottom" | Proteus vulgaris
 
|-
| height="13" align="center" valign="bottom" | 42
|  valign="bottom" | g-b
|  valign="bottom" | Pseudomonas aeruginosa
 
|-
| height="13" align="center" valign="bottom" | 43
|  valign="bottom" | g-b
|  valign="bottom" | Salmonella spp
 
|-
| height="13" align="center" valign="bottom" | 44
|  valign="bottom" | g-b
|  valign="bottom" | Serratia marcescens
 
|-
| height="13" align="center" valign="bottom" | 45
|  valign="bottom" | g-b
|  valign="bottom" | Serratia spp
 
|-
| height="13" align="center" valign="bottom" | 46
|  valign="bottom" | g-b
|  valign="bottom" | Shigella spp
 
|-
| height="13" align="center" valign="bottom" | 51
|  valign="bottom" | g-b
|  valign="bottom" | Stenotrophomonas spp
 
|-
| height="13" align="center" valign="bottom" | 33
|  valign="bottom" | g-c
|  valign="bottom" | Moraxella catarrhalis
 
|-
| height="13" align="center" valign="bottom" | 37
|  valign="bottom" | g-c
|  valign="bottom" | Neisseria gonorrhoeae
 
|-
| height="13" align="center" valign="bottom" | 38
|  valign="bottom" | g-c
|  valign="bottom" | Neisseria meningitidis
 
|-
| height="13" align="center" valign="bottom" | 60
|  valign="bottom" | mixed
|  valign="bottom" | mixed bacteria
 
|-
| height="13" align="center" valign="bottom" | 61
|  valign="bottom" | mixed
|  valign="bottom" | mixed bacteria and yeast/fungus
 
|-
| height="13" align="center" valign="bottom" | 62
|  valign="bottom" | mixed
|  valign="bottom" | mixed bacteria with at least one resistant gram negative
 
|-
| height="13" align="center" valign="bottom" | 63
|  valign="bottom" | mixed
|  valign="bottom" | mixed bacteria with at least one resistant gram positive (MRSA, VISA, VRSA, VRE)
 
|-
| height="13" align="center" valign="bottom" | 64
|  valign="bottom" | mixed
|  valign="bottom" | mixed resistant bacteria (either 86 or 87) with yeast/fungus
 
|-
| height="13" align="center" valign="bottom" | 59
|  valign="bottom" | other
|  valign="bottom" | Aspiration (early presentation, documented aspiration)
 
|-
| height="13" align="center" valign="bottom" | 65
|style="font-weight:bold"  valign="bottom" | other
|style="font-weight:bold;color:#0000FF"  valign="bottom" | Negative Culture
 
|-
| height="13" align="center" valign="bottom" | 68
|style="font-weight:bold"  valign="bottom" | other
|style="font-weight:bold;color:#008000"  valign="bottom" | Unknown Pathogen
 
|-
| height="13" align="center" valign="bottom" | 92
|style="font-weight:bold"  valign="bottom" | other
|style="font-weight:bold;color:#0000FF"  valign="bottom" | No Culture Sent
 
|-
| height="13" align="center" valign="bottom" | 69
|style="color:#99CC00"  valign="bottom" | parasite
|  valign="bottom" | Malaria
 
|-
| height="13" align="center" valign="bottom" | 70
|style="color:#99CC00"  valign="bottom" | parasite
|  valign="bottom" | OTHER-Parasite (giardia, amoeba, Crytosporidium, etc.)
 
|-
| height="13" align="center" valign="bottom" | 71
|style="color:#99CC00"  valign="bottom" | parasite
|  valign="bottom" | Pneumocystis carinii (PCP)
 
|-
| height="13" align="center" valign="bottom" | 72
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Adenovirus
 
|-
| height="13" align="center" valign="bottom" | 73
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Cytomegalovirus (CMV)
 
|-
| height="13" align="center" valign="bottom" | 74
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Herpes Simplex virus (HSV)
 
|-
| height="13" align="center" valign="bottom" | 75
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Influenza virus (all types includes Swine Flu)
 
|-
| height="13" align="center" valign="bottom" | 76
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Parainfluenza virus
 
|-
| height="13" align="center" valign="bottom" | 77
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | respiratory syncytial virus (RSV)
 
|-
| height="13" align="center" valign="bottom" | 78
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | Varicella/zoster virus (chicken pox/shingles) (VZV)
 
|-
| height="13" align="center" valign="bottom" | 79
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | OTHER-Virus
 
|-
| height="13" align="center" valign="bottom" | 95
|style="color:#FF0000"  valign="bottom" | virus
|  valign="bottom" | West Nile
 
|-
| height="13" align="center" valign="bottom" | 80
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Aspergillus spp
 
|-
| height="13" align="center" valign="bottom" | 81
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Blastomyces spp
 
|-
| height="13" align="center" valign="bottom" | 82
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida albicans
 
|-
| height="13" align="center" valign="bottom" | 83
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida glabrata
 
|-
| height="13" align="center" valign="bottom" | 84
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida lusitaniae
 
|-
| height="13" align="center" valign="bottom" | 85
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida parapsilosis
 
|-
| height="13" align="center" valign="bottom" | 86
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida tropicalis
 
|-
| height="13" align="center" valign="bottom" | 87
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Candida/yeast -OTHER
 
|-
| height="13" align="center" valign="bottom" | 88
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Cryptocuccus spp
 
|-
| height="13" align="center" valign="bottom" | 89
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Histplasma spp
 
|-
| height="13" align="center" valign="bottom" | 90
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | Mucor/Rhizopus/Alternaria spp
 
|-
| height="13" align="center" valign="bottom" | 91
|style="color:#00CCFF"  valign="bottom" | yeast/fungus
|  valign="bottom" | OTHER -Fungus
 
|}
 
*[[User:TOstryzniuk|TOstryzniuk]] 17:43, 1 June 2009 (CDT)
 
 
 


[[Category: Infection]]
[[Category: Infection]]
[[Category: Diagnosis Coding]]
[[Category: Diagnosis Coding]]

Revision as of 16:43, 1 June 2009

UPL - Universal Pathogen list.  These are used as subcodes for all infection that we track in our ICU and Medicine Database.
PathogenSubCode Type Pathogen
0 No Value No Value
4 anaerobe Anaerobe-Other (Prevotella, Bacteroides, peptostreptococcus or other)
5 anaerobe Bacteroides fragilis
12 anaerobe Clostridium difficile
13 anaerobe Clostridium other species (gangrene)
8 bacteria Chlamydia spp
30 bacteria Legionella spp
35 bacteria Mycobacteria-Other (not M. tuberculosis)
36 bacteria Mycoplasma spp
93 bacteria Syphilis-Treponema Pallidium
94 bacteria Lyme-Borrelia Burgdorferi
66 g- OTHER - Gram negative
67 g+ OTHER - Gram positive
20 g+c Enterococcus faecalis
21 g+c Enterococcus faecium
22 g+c Enterococcus -vancomycin-resistant (VRE)
23 g+c Enterooccus spp
32 g+c Micrococcus spp
47 g+c Staphylococcus aureus
48 g+c Staphylococcus aureus (methicillin-resistantant, MRSA)
49 g+c Staphylococcus epidermidis
50 g+c Staphylococcus spp
52 g+c Strep (other beta-hemolytic streptococci)
53 g+c Strep viridans (alpha-hemolytic strep other than Enterococcus or S. pneumoniae)
54 g+c Streptococcus agglactiae Group B
55 g+c Streptococcus pnemoniae
56 g+c Streptococcus pyogenes Group A
57 g+c Tuberculosis (Mycobacterium tuberculosis)
58 g+c Vancomycin-resistant/intermediate S. aureus (VISA/VRSA/VISA)
14 g+r Corynebacterium jeikeium
15 g+r Corynebacterium spp
31 g+r Listeria monocytogenes
1 g-b Acinetobacter baumanii
2 g-b Acinetobacter lwoffi
3 g-b Aeromonas hydrophila
6 g-b Burkholderia spp
7 g-b Campylobacter spp
9 g-b Citrobacter diversus
10 g-b Citrobacter freudii
11 g-b Citrobacter spp
16 g-b E. coli
17 g-b Enterobacter aerogenes
18 g-b Enterobacter cloacae
19 g-b Enterobacter spp
24 g-b ESBL (extended spectrum beta-lactamase) g-b, meropenem-resistant organism other than Stenotrophomonas
25 g-b Hemophilus influenzae
26 g-b Hemophilus spp
27 g-b Klebsiella oxytoca
28 g-b Klebsiella pneumoniae
29 g-b Klebsiella spp
34 g-b Morganella morganni
39 g-b Proteus mirabilis
40 g-b Proteus spp
41 g-b Proteus vulgaris
42 g-b Pseudomonas aeruginosa
43 g-b Salmonella spp
44 g-b Serratia marcescens
45 g-b Serratia spp
46 g-b Shigella spp
51 g-b Stenotrophomonas spp
33 g-c Moraxella catarrhalis
37 g-c Neisseria gonorrhoeae
38 g-c Neisseria meningitidis
60 mixed mixed bacteria
61 mixed mixed bacteria and yeast/fungus
62 mixed mixed bacteria with at least one resistant gram negative
63 mixed mixed bacteria with at least one resistant gram positive (MRSA, VISA, VRSA, VRE)
64 mixed mixed resistant bacteria (either 86 or 87) with yeast/fungus
59 other Aspiration (early presentation, documented aspiration)
65 other Negative Culture
68 other Unknown Pathogen
92 other No Culture Sent
69 parasite Malaria
70 parasite OTHER-Parasite (giardia, amoeba, Crytosporidium, etc.)
71 parasite Pneumocystis carinii (PCP)
72 virus Adenovirus
73 virus Cytomegalovirus (CMV)
74 virus Herpes Simplex virus (HSV)
75 virus Influenza virus (all types includes Swine Flu)
76 virus Parainfluenza virus
77 virus respiratory syncytial virus (RSV)
78 virus Varicella/zoster virus (chicken pox/shingles) (VZV)
79 virus OTHER-Virus
95 virus West Nile
80 yeast/fungus Aspergillus spp
81 yeast/fungus Blastomyces spp
82 yeast/fungus Candida albicans
83 yeast/fungus Candida glabrata
84 yeast/fungus Candida lusitaniae
85 yeast/fungus Candida parapsilosis
86 yeast/fungus Candida tropicalis
87 yeast/fungus Candida/yeast -OTHER
88 yeast/fungus Cryptocuccus spp
89 yeast/fungus Histplasma spp
90 yeast/fungus Mucor/Rhizopus/Alternaria spp
91 yeast/fungus OTHER -Fungus
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