UPL code table

* UPL - Universal Pathogen List. These are used as subcodes for all infection that we track in our ICU and Medicine Database.

• Also see: Pathogens for more information & discussion.

For the most up-to-date list of pathogens, see your PDA, Access database (CCMDB.mdb). This is the list as of June 1.09 and for orientation only.

Pathogen_subcode_number	Type	Pathogen ( UPL)
1	(g-b) Gram -ve bacteria	Acinetobacter baumanii
2	(g-b) Gram -ve bacteria	Acinetobacter lwoffi
72	virus	Adenovirus
3	(g-b) Gram -ve bacteria	Aeromonas hydrophila
4	anaerobe	Anaerobe-Other (Prevotella, Bacteroides, peptostreptococcus or other)
80	yeast/fungus	Aspergillus spp
59	(other) non pathogen subcodes	Aspiration (early presentation, documented aspiration)
5	anaerobe	Bacteroides fragilis
81	yeast/fungus	Blastomyces spp
6	(g-b) Gram -ve bacteria	Burkholderia spp
7	(g-b) Gram -ve bacteria	Campylobacter spp
82	yeast/fungus	Candida albicans
83	yeast/fungus	Candida glabrata
84	yeast/fungus	Candida lusitaniae
85	yeast/fungus	Candida parapsilosis
86	yeast/fungus	Candida tropicalis
87	yeast/fungus	Candida/yeast -OTHER
8	bacteria	Chlamydia spp
9	(g-b) Gram -ve bacteria	Citrobacter diversus
10	(g-b) Gram -ve bacteria	Citrobacter freudii
11	(g-b) Gram -ve bacteria	Citrobacter spp
12	anaerobe	Clostridium difficile
13	[[:Category: anaerobe | anaerobe	Clostridium other species (gangrene)
14	(g+r) Gram +ve rod	Corynebacterium jeikeium
15	(g+r) Gram +ve rod	Corynebacterium spp
88	yeast/fungus	Cryptocuccus spp
73	virus	Cytomegalovirus (CMV)
16	(g-b) Gram -ve bacteria	E. coli
17	(g-b) Gram -ve bacteria	Enterobacter aerogenes
18	(g-b) Gram -ve bacteria	Enterobacter cloacae
19	(g-b) Gram -ve bacteria	Enterobacter spp
20	(g+c) Gram +ve cocci	Enterococcus faecalis
21	(g+c) Gram +ve cocci	Enterococcus faecium
22	(g+c) Gram +ve cocci	Enterococcus -vancomycin-resistant (VRE)
23	(g+c) Gram +ve cocci	Enterooccus spp
24	(g-b) Gram -ve bacteria	ESBL or MRO (extended spectrum beta-lactamase), MRO (meropenem-resistant organism other than Stenotrophomonas)
25	(g-b) Gram -ve bacteria	Hemophilus influenzae
26	(g-b) Gram -ve bacteria	Hemophilus spp
74	virus	Herpes Simplex virus (HSV)
89	yeast/fungus	Histplasma spp
75	virus	Influenza virus (all types) {include Swine Flu H1N1_09 -June 1.09}
27	(g-b) Gram -ve bacteria	Klebsiella oxytoca
28	(g-b) Gram -ve bacteria	Klebsiella pneumoniae
29	(g-b) Gram -ve bacteria	Klebsiella spp
30	bacteria	Legionella spp. Legionella spp.
31	(g+r) Gram +ve rod	Listeria monocytogenes
94	bacteria	Lyme-Borrelia Burgdorferi Lyme Disease
69	parasite	Malaria
32	(g+c) Gram +ve cocci	Micrococcus spp
60	mixed	mixed bacteria
61	mixed	mixed bacteria and yeast/fungus
62	mixed	mixed bacteria with at least one resistant gram negative
63	mixed	mixed bacteria with at least one resistant gram positive (MRSA, VISA, VRSA, VRE)
64	mixed	mixed resistant bacteria (either 86 or 87) with yeast/fungus
33	(g-c) Category: Gram -ve cocci Gram -ve cocci	Moraxella catarrhalis
34	(g-b) Gram -ve bacteria	Morganella morganni
90	yeast/fungus	Mucor/Rhizopus/Alternaria spp
35	bacteria	Mycobacteria-Other (not M. tuberculosis)
36	[:Category: bacteria | bacteria]]	Mycoplasma spp
65	non pathogen subcodes	Negative Culture
37	(g-c) Category: Gram -ve cocci	Neisseria gonorrhoeae
38	(g-c) Gram -ve cocci	Neisseria meningitidis
92	non pathogen subcodes	No Culture Sent
0	No Value non pathogen subcodes	No Value
66	(g-) Gram -ve	OTHER - Gram negative
67	(g+) Gram +ve	OTHER - Gram positive
91	yeast/fungus	OTHER -Fungus
70	parasite	OTHER-Parasite (giardia, amoeba, Crytosporidium, etc.)
79	virus	OTHER-Virus
76	virus	Parainfluenza virus
71	parasite	Pneumocystis carinii (PCP)
39	(g-b) Gram -ve bacteria	Proteus mirabilis
40	(g-b) Gram -ve bacteria	Proteus spp
41	(g-b) Gram -ve bacteria	Proteus vulgaris
42	(g-b) Gram -ve bacteria	Pseudomonas aeruginosa
77	virus	Respiratory Syncytial Virus (RSV)
43	(g-b) Gram -ve bacteria	Salmonella spp
44	(g-b) Gram -ve bacteria	Serratia marcescens
45	(g-b) Gram -ve bacteria	Serratia spp
46	(g-b) Gram -ve bacteria	Shigella spp
47	(g+c) Gram +ve cocci	Staphylococcus aureus
48	(g+c) Gram +ve cocci	Staphylococcus aureus (methicillin-resistantant, MRSA)
49	(g+c) Gram +ve cocci	Staphylococcus epidermidis
50	(g+c) Gram +ve cocci	Staphylococcus spp
51	(g-b) Gram -ve bacteria	Stenotrophomonas spp
52	(g+c) Gram +ve cocci	Strep (other beta-hemolytic streptococci)
53	(g+c) Gram +ve cocci	Strep viridans (alpha-hemolytic strep other than Enterococcus or S. pneumoniae)
54	(g+c) Gram +ve cocci	Streptococcus agglactiae Group B
55	(g+c) Gram +ve cocci	Streptococcus pnemoniae
56	(g+c) Gram +ve cocci	Streptococcus pyogenes Group A
93	bacteria	Syphilis-Treponema Pallidium Syphilis-Treponema Pallidium
57	(g+c) Gram +ve cocci	Tuberculosis (Mycobacterium Tuberculosis)
68	non pathogen subcodes	Unknown Pathogen
58	(g+c) Gram +ve cocci	Vancomycin-resistant/intermediate S. aureus (VISA/VRSA/VISA)
78	virus	Varicella/zoster virus (chicken pox/shingles) (VZV)
95	virus	West Nile

• TOstryzniuk 17:43, 1 June 2009 (CDT)