Centralized import from Ed.mdb

The Access file Creating Centralized import from Ed.mdb contains the code needed to import Ed's old data into centralized_data.mdb.

It is stored on x:\ccmdb\Centralized import from Ed

Use

Open Modules, make sure paths in public constants on top are correct, run Public Sub Import().

resolutions for differences between ed's and centralized

Legacy Labs values from TMSX

We are going to import the ones that we have slots for, and leave the rest in the final output from Ed in case anyone ever wants to access them in the future.

serials for early CC data

Early CC records don't have serial numbers. I assigned negative numbers arbitrarily to these to be able to generate D_IDs.

duplicates

turned out there were a few duplicates in ed's where a serial was used twice for the same hospital/location. These were resolved in Ed's data and should not be a problem for the final import.

Apache, LOS, etc

Importing these into a table "L_Aux".

Change Requests

• make sure that 9*9 record is deleted form PHI as well Ttenbergen 15:40, 2014 January 26 (CST)
  • I think this is done, need to confirm after next import Ttenbergen 17:05, 2014 January 30 (CST)

• add code to import the current "other .mdbs" (or do once, manually... may be no need to code this, it's pretty straightforward)
  • added
    • pharmacy
    • tasks

tiss

• confirm pharmacy is right now
  • can't find the data in orig_tables... emailed Julie to find out more. Ttenbergen 13:05, 2013 December 30 (CST)
    • Julie replied that they are in X:\Data_cleaning\CC_rawdata\Pha121913.csv and Pha45828.csv;
• import tasks from tasks.mdb for consistency Ttenbergen 16:29, 2013 December 30 (CST)

Change Log

ver 2014-01-19

• replaced orig_med_to_L_Log with mod version of orig_cc_to_L_Log Ttenbergen 19:20, 2014 January 19 (CST)
• changed orig_cc_to_L_Log to exclude ADLs Ttenbergen 19:21, 2014 January 19 (CST)
• fixed serial 99999 deletion for Med, had previously only fixed for CC Ttenbergen 21:46, 2014 January 19 (CST)
• s_AdmitDischarge, imported locations that are in orig_* records but no longer active. Ttenbergen 21:46, 2014 January 19 (CST)
  • added field "active" , imported locations that are in orig_* records but no longer active. Ttenbergen 21:46, 2014 January 19 (CST)
  • created column "old_code" to accomodate 3-letter code "oth", which imports as "ot" due to field length restrictions. Ttenbergen 21:46, 2014 January 19 (CST)
• added queries 1_check_no_tasks and 1_check_tasks_orphans and 1_check_task_dupes for pre-task import checks Ttenbergen 00:42, 2014 January 31 (CST)
• added queries tasks_to_dx, tasks_to_dx_u, tasks_resolver and TASKS_d_id to process and import tasks Ttenbergen 00:42, 2014 January 31 (CST)

ver 2014-01-09

• AP_Chronic to ap_chronic: IIf([orig_cc_apa].[CH]="N","9No CH","0HasChronic") Ttenbergen 10:36, 2014 January 10 (CST)
  • orig_med_to_L_Log
  • orig_cc_to_L_Log
• AP_AdmitType: IIf([surgical]=False,"Medical",IIf([ES]="N","Elect.Surg","Surg.Emerg")) Ttenbergen 10:36, 2014 January 10 (CST)
  • orig_med_to_L_Log
  • orig_cc_to_L_Log
• added Pat_ID to orig_med_to_L_Log Ttenbergen 17:21, 2014 January 14 (CST)

ver 2013-12-23

• automated running of query "x_Infection_pathogen_fix" upon import. Ttenbergen 14:20, 2013 December 23 (CST)
• Added MedTMS exported ADL import, table was not being processed before Ttenbergen 17:13, 2013 December 23 (CST)
• ADLs (ADL General Collection Information)
  • imported table s_ADLOptions to resolve entries needed for l_log.adl_* fields Ttenbergen (2013 December 23)
  • updated query orig_cc_to_L_Log to include ADLs Ttenbergen (2013 December 23)
• link to s_GCS in centralized.mdb Ttenbergen 12:44, 2013 December 30 (CST)
• updated query orig_cc_to_L_Log to use s_GCS to populate with values used in CCMDB rather than scores from TMSX Ttenbergen 12:44, 2013 December 30 (CST)
• changed study 99999 fix to only delete if ((orig_cc_reg.STUDY)=99999 and (orig_cc_reg.CHART)=999999999);" Ttenbergen 12:49, 2013 December 30 (CST)
• confirmed that L_Labs_Flowsheet has values, ready for validation Ttenbergen 12:55, 2013 December 30 (CST)
• linked in L_Pharm_Flowsheet Ttenbergen 12:56, 2013 December 30 (CST)
• added code to import pharmacy from pharmacy.mdb Ttenbergen 14:47, 2013 December 30 (CST)

ver 2013-11-18

This is not the date it was made, but the date documenting started. after I lost and had to find the file. :-)

• fixed lab importing
• moved L_aux into centralized db and including in import and linking.
• set the record_Status to complete for all imported
• added query "x_Infection_pathogen_fix" to put dx code and pathogen number into their respective places.
• fixed PHI import query for medicine, it was excluding names and DOB for some reason.