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This is the list of ICD10 dx codes that need to be codes as Combined ICD10 codes with a dx code from Category:Pathogens.

ICD10_code	description
A04.9	Gastrointestinal infection (gastroenteritis, colitis), bacterial, NOS
A05.9	Food poisoning (due to foodborne bacterial toxin), NOS
A07	Gastrointestinal infection (gastroenteritis, colitis), protozoal, NOS
A08	Gastrointestinal infection (gastroenteritis, colitis), viral
A09	Gastrointestinal infection (gastroenteritis, colitis), bug NOS
A28.9	Zoonotic bacterial disease (directly transmitted from animal)
A48.0	Gas gangrene (usually due to Clostridium perfringens)
A48.3	Toxic shock syndrome
A48.8	Bacterial infection, NOS
A49.9	Bacteremia
A64	Sexually transmitted (venereal) infections, NOS
A99	Viral hemorrhagic fever, NOS
B17.9	Viral hepatitis, acute, NOS
B18.9	Viral hepatitis, chronic, NOS
B27	Infectious mononucleosis (usually due to Epstein-Barr virus)
B33.2	Viral carditis
B34.9	Viral infection, NOS
B35	Dermatophytosis (tineas, cutaneous fungal infection)
B49	Fungemia, NOS
B89	Parasitic infection, NOS
B98	Other specified infectious agents as the cause of diseases classified by other ICD10 code
B99	Infectious disease NOS
G02.0	Meningitis, viral - incl West Nile
G02.1	Meningitis, fungal
G02.8	Meningitis, infectious NOS
G05.0	Encephalitis, meningoencephalitis, myelitis, encephalomyelitis, bacterial
G05.1	Encephalitis, meningoencephalitis, myelitis, encephalomyelitis, viral
G05.2	Encephalitis, meningoencephalitis, myelitis, encephalomyelitis, infectious NOS
H44.0	Endophthalmitis, infectious
H60.3	Otitis externa, infectious
H66	Otitis media, infectious
H73.1	Chronic myringitis
I26.90	Pulmonary embolism (thromboembolism), septic
I30.1	Pericarditis, acute, infective
I33.0	Endocarditis, infective, acute or subacute
I40.0	Myocarditis/carditis, acute infective
I76	Septic Thrombosis or Embolism, NOS
J06	Upper respiratory infection, acute NOS
J12	Pneumonia, viral
J15	Pneumonia, bacterial
J17.2	Pneumonia, fungal/yeast
J18	Pneumonia, NOS
J22	Lower respiratory tract infection, acute infectious
J36	Peritonsillar abscess
J86	Empyema (pyothorax)
J95.01	Tracheostomy complication, infection of site
J95.88	Pneumonia, ventilator-associated (VAP)
J98.51	Mediastinitis, infectious
K35	Appendicitis, with or without rupture or peritonitis
K61	Anus or rectum, abscess
K63.0	Abscess of intestine
K65	Peritonitis, infectious
K68.1	Retroperitoneal abscess
K68.12	Psoas abscess
K75.0	Liver abscess
K83.0	Cholangitis
L01	Impetigo
L02	Skin abscess
L03	Cellulitis
L08	Infection of skin or subcutaneous (soft) tissue, NOS
M00	Arthritis, infectious (septic arthritis)
M46.2	Vertebrae, osteomyelitis (bone infection)
M46.3	Intervertebral disc, infection (infective discitis)
M60.0	Muscle, infection (pyomyositis, infective myositis)
M65.1	Synovitis, tenosynovitis, infective (any site)
M71.1	Bursitis, infective (any site)
M72.6	Necrotizing fasciitis
M86.1	Bone infection (osteomyelitis), acute
M86.6	Bone infection (osteomyelitis), chronic
M86.9	Bone infection (osteomyelitis), NOS
N10	Kidney infection, acute (pyelonephritis)
N11	Kidney infection, chronic (pyelonephritis)
N15.1	Kidney, renal abscess or perinephric abscess
N30.0	Bladder, cystitis, acute infectious
N39.0	Urinary tract infection, NOS
N41.2	Prostate, abscess
N44.90	Epididymis, infection (epididymitis)
N49.3	Fournier's gangrene
O86	Puerperal (post-delivery) infections or sepsis
O88.3	Pulmonary embolism, septic obstetrical thromboembolism
R57.2	Shock, septic
R65.0	Sepsis (SIRS due to infection, without acute organ failure)
R65.1	Severe sepsis
T80.2	Iatrogenic, infection, related to vascular access other than central line
T81.4	Iatrogenic, infection, following a procedure or surgery, NOS
T82.6	Iatrogenic, infection, heart valve prosthesis (incl prosthetic valve endocarditis)
T82.7	Iatrogenic, infection, cardiac or vascular prosthetic device or implant or graft NOS
T82.70	Iatrogenic, infection, central venous catheter-related bloodstream infection (CVC-BSI, CLI)
T83.5	Iatrogenic, infection, urinary catheter
T84.7	Iatrogenic, infection, internal orthopedic prosthetic device or implant or graft or bone device
T85.7	Iatrogenic, infection, internal prosthetic device or implant or graft NOS
Y95	Nosocomial infection, NOS
Z22	Colonized with organism (not infected)
Z22.9	Carrier of infectious disease, unspecified

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Combined ICD10 codes ‎ (← links)