Project Overstay2: Difference between revisions

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Data Collection: removed sublist of only some charlson dxs since actually all of them are used for Charlson_nh
(4 intermediate revisions by the same user not shown)
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* [[Glasgow Coma Scale]]
* [[Glasgow Coma Scale]]
* any [[Admit Diagnoses]] contributing to the [[Charlson Comorbidities in ICD10 codes]] of ''Chronic pulmonary disease, Congestive heart failure, Rheumatic disease or Renal disease''(as generated using same mechanism as s_ICD10_Charlson_Comorbids query; let's not use a separate list for this)
* any [[Admit Diagnoses]] contributing to the [[Charlson Comorbidities in ICD10 codes]] of ''Chronic pulmonary disease, Congestive heart failure, Rheumatic disease or Renal disease''(as generated using same mechanism as s_ICD10_Charlson_Comorbids query; let's not use a separate list for this)
{{collapsable|always='''{{PAGENAME}}-relevant Charlson''' codes
|full=
{{#ask: [[-Has subobject::Charlson Comorbidities in ICD10 codes]][[Charlson_component::Chronic pulmonary disease||Congestive heart failure||Rheumatic disease||Renal disease]]
|?Charlson_ICD10Code=ICD10 code
|?Charlson_ICD10Description=Diagnosis description
|?Charlson_component=Charlson component
|sort=Charlson_component, Charlson_ICD10Code
|order=ascending
|format=table
|limit=500
|mainlabel=-
}}}}
* [[Admit Diagnosis]] or [[Comorbid Diagnosis]] of Dementia:  
* [[Admit Diagnosis]] or [[Comorbid Diagnosis]] of Dementia:  
{{ListICD10Category | categoryName = Dementia}}
{{ListICD10Category | categoryName = Dementia}}
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{{DT |  
{{DT |  
*OutsideWPG - I have used [[Previous Location]] because Leigh Anne specified the patient came from a facility outside of Winnipeg.
*OutsideWPG - I have used [[Previous Location]] because Leigh Anne specified the patient came from a facility outside of Winnipeg.
**MB - I would think Leigh Anne had used the [[Province]] because the data set  has no [[Postal Code]]  yet
** MB - I would think Leigh Anne had used the [[Province]] because the data set  has no [[Postal Code]]  yet
*** Will ask Dr. Roberts what this was all about to better understand what to use now. Specifically, if we use previous locaiton, would we only care about hospitals, or also e.g. nursing stations, PCH, hospice, "unknown/other" loc_types.  [[User:Ttenbergen|Ttenbergen]] 16:51, 24 January 2025 (CST)
** I just checked the query ''check_from_out_of_town'' I used to derive this and it only considered [[Pre-admit Inpatient Institution]] having geog like "out-of*"! [[User:Ttenbergen|Ttenbergen]] 16:57, 24 January 2025 (CST)
*** Will ask Dr. Roberts what this was all about to better understand what to use now. Specifically, if we use previous location, would we only care about hospitals, or also e.g. nursing stations, PCH, hospice, "unknown/other" loc_types.  [[User:Ttenbergen|Ttenbergen]] 16:51, 24 January 2025 (CST)
}}
}}


{{DJ
{{DJ
|*Charlson categories are provided but the CCMDB Script model  only includes MI, Pulmonary, Connective, Renal
|*Charlson categories are provided but the CCMDB Script model  only includes MI, Pulmonary, Connective, Renal
** It also contains the full score as part of Charlson_nh. [[User:Ttenbergen|Ttenbergen]] 19:15, 25 January 2025 (CST)
** I think "connective" became "Rheumatic disease" in ICd10, right? [[User:Ttenbergen|Ttenbergen]] 16:41, 24 January 2025 (CST)  
** I think "connective" became "Rheumatic disease" in ICd10, right? [[User:Ttenbergen|Ttenbergen]] 16:41, 24 January 2025 (CST)  
}}
}}
**NH (Nursing Home) - these data are from the tmp Overstay and the NH start dates from Manitoba Health which DR Roberts requested. we do not have the [[Pre acute living situation]] at that time but I agree just to use the [[Pre acute living situation]] . When I Have looked at the CCMDB script I noticed that NH includes PCH and Chronic Health Facility, is this correct?  
**NH (Nursing Home) - these data are from the tmp Overstay and the NH start dates from Manitoba Health which DR Roberts requested. we do not have the [[Pre acute living situation]] at that time but I agree just to use the [[Pre acute living situation]] . When I Have looked at the CCMDB script I noticed that NH includes PCH and Chronic Health Facility, is this correct?  
*ADL score - I have used the 0,3,6  values (same ADL as in ALERT score)
*ADL score - I have used the 0,3,6  values (same ADL as in ALERT score)
{{DT |  
{{Discuss |  
* ADLmean_nh - in the CCMDB Script it is written -- Adlmean_nh = (ADLScore - 12)*(from a nursing home),  what does 12 mean?  
* ADLmean_nh - in the CCMDB Script it is written -- Adlmean_nh {{=}} (ADLScore - 12)*(from a nursing home),  what does 12 mean?  
** Very good question. TT needs to look into...  
** Very good question. The function adl_sc used to get the individual scores just generates a score of 0, 3 or 6, or -1 if given bad input. That doesn't explain why -12. And I can't imagine why this would be. But it's consistent between two functions, so unlikely to be just a finger fumble. [[User:Ttenbergen|Ttenbergen]] 19:15, 25 January 2025 (CST)
}}
}}
** same with Adlmean_age = (ADLScore - 12)*(age), what does 12 mean?  
** same with Adlmean_age = (ADLScore - 12)*(age), what does 12 mean?  
** Charlson_nh = (Charlson score)*(from a nursing home)  -- this is clear. --[[User:JMojica|JMojica]] 13:53, 24 January 2025 (CST)
** Charlson_nh = (Charlson score)*(from a nursing home)  -- this is clear. --[[User:JMojica|JMojica]] 13:53, 24 January 2025 (CST)

Revision as of 19:33, 25 January 2025

Projects
Active?: planned
Program: Med
Requestor: Dan Roberts
Collection start: within the next few weeks "within the next few weeks" contains an extrinsic dash or other characters that are invalid for a date interpretation.
Collection end: continuous "continuous" contains an extrinsic dash or other characters that are invalid for a date interpretation.

Not live yet!

Data Collection

For any medicine record, enter the Minimal dataset +

Dementia codes:

Generation of data (will be moved before go-live)

  • In the generation of data, I have used the following:


  • OutsideWPG - I have used Previous Location because Leigh Anne specified the patient came from a facility outside of Winnipeg.
    • MB - I would think Leigh Anne had used the Province because the data set has no Postal Code yet
    • I just checked the query check_from_out_of_town I used to derive this and it only considered Pre-admit Inpatient Institution having geog like "out-of*"! Ttenbergen 16:57, 24 January 2025 (CST)
      • Will ask Dr. Roberts what this was all about to better understand what to use now. Specifically, if we use previous location, would we only care about hospitals, or also e.g. nursing stations, PCH, hospice, "unknown/other" loc_types. Ttenbergen 16:51, 24 January 2025 (CST)
  • SMW


  • Cargo


  • Categories


  • Charlson categories are provided but the CCMDB Script model only includes MI, Pulmonary, Connective, Renal
    • It also contains the full score as part of Charlson_nh. Ttenbergen 19:15, 25 January 2025 (CST)
    • I think "connective" became "Rheumatic disease" in ICd10, right? Ttenbergen 16:41, 24 January 2025 (CST)
  • SMW


  • Cargo


  • Categories
    • NH (Nursing Home) - these data are from the tmp Overstay and the NH start dates from Manitoba Health which DR Roberts requested. we do not have the Pre acute living situation at that time but I agree just to use the Pre acute living situation . When I Have looked at the CCMDB script I noticed that NH includes PCH and Chronic Health Facility, is this correct?
  • ADL score - I have used the 0,3,6 values (same ADL as in ALERT score)
  • ADLmean_nh - in the CCMDB Script it is written -- Adlmean_nh = (ADLScore - 12)*(from a nursing home), what does 12 mean?
    • Very good question. The function adl_sc used to get the individual scores just generates a score of 0, 3 or 6, or -1 if given bad input. That doesn't explain why -12. And I can't imagine why this would be. But it's consistent between two functions, so unlikely to be just a finger fumble. Ttenbergen 19:15, 25 January 2025 (CST)
  • SMW


  • Cargo


  • Categories
    • same with Adlmean_age = (ADLScore - 12)*(age), what does 12 mean?
    • Charlson_nh = (Charlson score)*(from a nursing home) -- this is clear. --JMojica 13:53, 24 January 2025 (CST)

Data Entry Instructions

will add these as we come closer to implementing, but it will be a button again

Sources

  • for green, a form TBD
  • rest: as usual

<details?>

<clarifications, usually come up during first few days of collection>

Special Cases

Data Use

This data is being collected as for Project Overstay2.

Consistency Checks

  • we will need to re-apply what was set up before or set up new ones.

Data Integrity Checks (automatic list)

none found

Related articles

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