Category:Pathogens

• Pathogens

A

• Acinetobacter species
• Adenovirus
• Aspergillus

B

• Bacillus fragilis (B. frag)
• Bacteria, NOS
• Blastomyces
• Bug
• Bugs

C

• Candida species
• Chlamydia trachomatis (bug responsible for regular sexually transmitted chlamydia)
• Citrobacter species
• Clostridium perfringens
• Coccidioides
• Coronavirus
• COVID-19 (SARS-COV-2)
• Cryptococcus
• Cytomegalovirus (CMV)

E

• Entamoeba histolytica (amoebic infection of non-intestinal sites)
• Enterobacter species
• Enterococcus species
• Enterovirus - incl coxsackievirus, echovirus
• Escherichia coli (E. coli)

F

• Fungus or yeast, NOS

H

• Haemophilus influenzae (H. flu)
• Helicobacter pylori (H. pylori)
• Herpes simplex virus (HSV)
• Histoplasma

I

• Infectious organism, unknown
• Influenza virus NOS -- should almost never be used

K

• Klebsiella species

L

• Legionella
• Listeria
• Lyme disease OR for buglist Borrelia burgdorferi or B. mayonii

M

• Measles virus
• Mosquito-borne viruses (causes of encephalitis)
• Mucormycetes
• Mumps virus
• Mycobacterium avium-intracellulare (MAC)
• Mycobacterium tuberculosis (M. TB)
• Mycoplasma pneumoniae

N

• Neisseria gonorrhea (gonococcus)
• Neisseria meningitidis (meningococcus)
• Nocardia (nocardiosis)
• Nontuberculous mycobacteria
• Not an Infection (ICD10 pathogen alternative)

O

• Other type of infectious organism, NOS

P

• Papillomavirus
• Paracoccidioides
• Parainfluenza virus
• Parvovirus
• Pathogen
• Pneumocystis Jirovecii or Pneumocystis Carinii
• Proteus mirabilus (morganii)
• Protozoa, NOS
• Pseudomonas

R

• Rabies OR for buglist rabies virus
• Reovirus
• Respiratory syncytial virus (RSV)
• Retrovirus
• Rubella virus (German measles virus)

S

• Salmonella species
• Serratia species
• Spirochetes, NOS - incl yaws, louse-borne, tick-borne
• Sporothrix
• Staphylococcus aureus
• Staphylococcus, NOS
• Stenotrophomonas species
• Streptococcus group A (strep pyogenes)
• Streptococcus group B (strep agalactiae)
• Streptococcus group D
• Streptococcus group G
• Streptococcus pneumoniae
• Streptococcus, NOS

T

• Tick-borne viruses (causes of encephalitis)
• Toxoplasmosis OR for buglist Toxoplama gondii
• Treponema pallidum (Syphilis)

V

• Varicella zoster virus (VZV)
• Virus, NOS

W

• West Nile virus